kallisto - Quantify abundances of transcripts from RNA-Seq data

Property Value
Distribution NetBSD 7.0
Repository NetBSD i386
Package filename kallisto-0.45.0nb1.tgz
Package name kallisto
Package version 0.45.0nb1
Package release -
Package architecture i386
Package type tgz
Category biology
Homepage https://pachterlab.github.io/kallisto/
License 2-clause-bsd
Maintainer -
Download size 606.62 KB
Installed size 969.81 KB
Kallisto is a program for quantifying abundances of transcripts from RNA-Seq
data, or more generally of target sequences using high-throughput sequencing
reads. It is based on the novel idea of pseudoalignment for rapidly determining
the compatibility of reads with targets, without the need for alignment.


Package Version Architecture Repository
kallisto-0.45.0nb1.tgz 0.45.0nb1 amd64 NetBSD
kallisto - - -


Name Value
hdf5 >= 1.8.11
htslib >= 1.8
libaec >= 1.0.4


Type URL
Mirror ftp.netbsd.org
Binary Package kallisto-0.45.0nb1.tgz
Source Package kallisto

Install Howto

Install kallisto tgz package:

# pkg_add kallisto

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