vsearch - Versatile open-source tool for metagenomics

Property Value
Distribution NetBSD 8.0
Repository NetBSD amd64
Package filename vsearch-2.13.4.tgz
Package name vsearch
Package version 2.13.4
Package release -
Package architecture amd64
Package type tgz
Category biology
Homepage https://github.com/torognes/vsearch
License gnu-gpl-v3
Maintainer -
Download size 156.08 KB
Installed size 486.18 KB
VSEARCH supports de novo and reference based chimera detection,
clustering, full-length and prefix dereplication, rereplication,
reverse complementation, masking, all-vs-all pairwise global
alignment, exact and global alignment searching, shuffling,
subsampling and sorting. It also supports FASTQ file analysis,
filtering, conversion and merging of paired-end reads.
The aim of this project is to create an alternative to the USEARCH
tool developed by Robert C. Edgar (2010).


Package Version Architecture Repository
vsearch - - -


Type URL
Mirror ftp.netbsd.org
Binary Package vsearch-2.13.4.tgz
Source Package vsearch

Install Howto

Install vsearch tgz package:

# pkg_add vsearch

See Also

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